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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804904.1_cds_XP_016491071.1_8128
CDS Infomation

[gene=LOC107810756] [db_xref=GeneID:107810756] [protein=protein HOTHEAD-like isoform X2] [protein_id=XP_016491071.1] [location=join(35563..35659,36569..36941,39682..39992,40081..40466,40666..41234,41731..41785)] [gbkey=CDS]
Sequence

ATGGCTGTGGTTGGTGGTGCAGCAGCTCTACCTCTGATTTTCAAGCTTCTTCTCTCTTTA
CTTCTATGTTTTAACTCTTCTCCTTCTCTTACTCAAGCAGGCAAATGGGTACCGTGGGAA
GATAGATATCCATTCATAAGAGAAGCAAGTTCATTCTCCTCATCATCAAATAATGCTAAT
AATAATAAGGCTTATGACTATATAATAGTTGGAGGTGGCACAGCTGGTTGTCCTTTGGCT
GCAACTTTGTCACAGAAATTTAGTGTATTATTGCTGGAAAGAGGCGGAGTTCCATTTGCA
AATGCAAATGTGTCTTTCATGCAAAATTTCCACATCGCTTTGGCTGACACTTCACCTTCT
TCTGCTTCTCAATATTTCGTCTCTACCGATGGCGTCTTTAATTCTAGAGCTCGAGTTTTA
GGTGGTGGCACTTGCATTAATGCTGGTTTTTACACTCGCGCTGGCCCCAGTTACATAAAG
AAAGCAGGTTGGGATTCTAAATTGGTGAATGAATCATATCCTTGGATTGAGAAACAAATT
GTTCATAGGCCAAACTTGGCTCCATGGCAAAGAGCAGTAAGGGATAGTCTTCTTGAAATT
GGTATCTCACCATTCAATGGATTCACTTATGATCACATCTATGGAACTAAGGTTGGTGGA
ACCATATTCGACCGGTTTGGACGTCGTCATACTGCAGCTGAACTACTTGCCTCAGCTAAT
CCAAAGAAGTTGGATGTTTTGGTGCATGCCACAGTTCAAAAGATTGATTTTGATACATCA
GGAAAGAAGCCAAGGGCAGTGGGAGTCATTTTCAAAGACGAAAATGGGAACCAACACAAA
GCATTTCTTTCAAAGAGGAAAGGAAGTGAAATTATAGTGTCATCTGGTGCAATTGGTAGC
CCTCATATTTTGATGCTTAGTGGAATTGGACCAAAGGCCGAGTTGGAAAAGCTGAATATC
CCGGTGGTGCTTGACAATAAGTTCGTTGGCCAAGGCATGTCGGATAACCCCTTAAACACG
ATCTTCGTTCCCACAAATAGGCATGTTGAGCAGTCATTGATTCAGACTGTAGGAATTACT
AAGGCGGGGGTCTATATCGAAGCTAGTAGTGGATTTGGACAGTCCGGAGATAGCATCCGT
TGCAACCATGGAGTCGCTTCAGCTGAGATTGGACAACTGTCCACCATTCCTCCAAAGCAG
AGAACATTTGAAGCAATTGAAGCATACCGAAGAAGCAAGAAAAACATTCCACACGAGTTG
TTTAGAGGAGGTTTCATCTTAGAAAAAATAGCAACACCTTTGTCAAGAGGGAACATTAGC
CTTGTCACTACAAATGCCGATGACAACCCTTCAATCACCTTCAACTACTTCAGCCATCCA
CGTGATCTAAAGCGATGTGTAGATGGAATACGCATTGTGGAGAAGATCGCGAAATCCAAA
CACTTCACCAACTACACACAATGTGACAAAGAGACACTAGATAAGCTCCTTAACATGAGT
GTCCAAGCTAATGTTAATCTTATACCAAAACACACTAACAACACACAGTCTTTAGAACAG
TTCTGCAAAGATACTGTGATCACAATATGGCATTACCATGGCGGATGTCATGTTGGCAAG
GTGATCGCACCGGATTACAGGGTTCTTGGTGTCCATAGGCTCCGAGTTATTGATGGTTCG
ACGTTTGAAGAGTCGCCAGGCACAAATCCTCAAGCCACTGTTATGATGATGGGCAGGTAC
ATGGGAGTGAAGATTCTAAGAGAGAGATTAGGAAGAACAGCTGGTTTGTAA

Peptide Sequence

PEP ID

XP_016491071.1
PEP Infomation

PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana tabacum]
Sequence

MAVVGGAAALPLIFKLLLSLLLCFNSSPSLTQAGKWVPWEDRYPFIREASSFSSSSNNAN
NNKAYDYIIVGGGTAGCPLAATLSQKFSVLLLERGGVPFANANVSFMQNFHIALADTSPS
SASQYFVSTDGVFNSRARVLGGGTCINAGFYTRAGPSYIKKAGWDSKLVNESYPWIEKQI
VHRPNLAPWQRAVRDSLLEIGISPFNGFTYDHIYGTKVGGTIFDRFGRRHTAAELLASAN
PKKLDVLVHATVQKIDFDTSGKKPRAVGVIFKDENGNQHKAFLSKRKGSEIIVSSGAIGS
PHILMLSGIGPKAELEKLNIPVVLDNKFVGQGMSDNPLNTIFVPTNRHVEQSLIQTVGIT
KAGVYIEASSGFGQSGDSIRCNHGVASAEIGQLSTIPPKQRTFEAIEAYRRSKKNIPHEL
FRGGFILEKIATPLSRGNISLVTTNADDNPSITFNYFSHPRDLKRCVDGIRIVEKIAKSK
HFTNYTQCDKETLDKLLNMSVQANVNLIPKHTNNTQSLEQFCKDTVITIWHYHGGCHVGK
VIAPDYRVLGVHRLRVIDGSTFEESPGTNPQATVMMMGRYMGVKILRERLGRTAGL

Transcript Sequence

Gene sequence data has not been registered.